WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C49C3.1 Sequence Name  C49C3.1
Length (nt)  2142   Chromosome Location  IV: 17312424-17312594
Chromosome . Primary Identifier  IV Chromosome Location . Start  17312424
Chromosome Location . End  17312594
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49C3.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43474 SNF-9 79.6 713 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00001253
WBRNAi00002131
WBRNAi00042772
WBRNAi00042773
WBRNAi00012116
WBRNAi00020527
WBRNAi00029962
WBRNAi00111022
WBRNAi00110994

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C49C3.1 17312424 17312594 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004908 snf-9 C49C3.1 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:C49C3.1 17312424 17312594 1
CDS:C49C3.1 17312646 17312733 1
CDS:C49C3.1 17312776 17312910 1
CDS:C49C3.1 17312957 17313199 1
CDS:C49C3.1 17313440 17313542 1
CDS:C49C3.1 17313588 17313729 1
CDS:C49C3.1 17313773 17313886 1
CDS:C49C3.1 17313932 17314051 1
CDS:C49C3.1 17314095 17314460 1
CDS:C49C3.1 17314506 17314605 1
CDS:C49C3.1 17314740 17314870 1
CDS:C49C3.1 17314915 17314998 1
CDS:C49C3.1 17315043 17315222 1
CDS:C49C3.1 17315265 17315429 1

1 Sequence

Length
2142

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C49C3.1.1 C49C3.1.1 2457   IV: 17312142-17315462