Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:MTCE.13 | MTCE.13 |
62
 |
MtDNA: 3244-3305 |
Other
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrMtDNA_3306..3306 | 1 | MtDNA: 3306-3306 | Caenorhabditis elegans |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts enriched in invading anchor cells comparing to in whole animal. | DESeq2v.1.30.1. fold change >= 2, FDR < 0.05 | WBPaper00065258:anchor-cell_enriched | |
| Transcripts that showed significantly altered expression in olrn-1(ums9) comparing to in N2 animals. | The Ballgown package from the Bioconductor software suite (version 3.8) was used to run a custom R script in R console(R Version 3.5) to analyze the differential gene expression, visualize the data, and perform statistical tests for differential expressionwith multiple test correction. A gene was considered to be differentially regulated if its fold change versus wild-type was greater thantwo, the adjusted p value was less than 0.05, and its RPKM was greater than one. | WBPaper00059567:olrn-1(ums9)_regulated |