WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R02C2.3a.1 Sequence Name  R02C2.3a.1
Length (nt)  2310   Chromosome Location  V: 246608-251752
Chromosome . Primary Identifier  V Chromosome Location . Start  246608
Chromosome Location . End  251752 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02C2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006419 oac-39 R02C2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R02C2.3a R02C2.3a 2220   V: 246651-246854

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R02C2.3a.1 246608 251752 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169663   247   V: 246608-246854 Caenorhabditis elegans
Exon169667   214   V: 246909-247122 Caenorhabditis elegans
Exon169669   116   V: 247965-248080 Caenorhabditis elegans
Exon169671   112   V: 248131-248242 Caenorhabditis elegans
Exon169673   227   V: 248304-248530 Caenorhabditis elegans
Exon169675   368   V: 248913-249280 Caenorhabditis elegans
Exon169677   94   V: 249867-249960 Caenorhabditis elegans
Exon169679   190   V: 250005-250194 Caenorhabditis elegans
Exon169681   94   V: 250242-250335 Caenorhabditis elegans
Exon169683   128   V: 250389-250516 Caenorhabditis elegans
Exon169685   136   V: 250953-251088 Caenorhabditis elegans
Exon169687   199   V: 251136-251334 Caenorhabditis elegans
Exon169690   185   V: 251568-251752 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R02C2.3a.1 246608 251752 -1

1 Sequence

Length
2310

1 Sequence Ontology Term

Identifier Name Description
transcript