WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R02C2.3a Sequence Name  R02C2.3a
Length (nt)  2220   Chromosome Location  V: 246651-246854
Chromosome . Primary Identifier  V Chromosome Location . Start  246651
Chromosome Location . End  246854
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02C2.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50684 OAC-39, isoform a 84.4 739 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00051118
WBRNAi00017309
WBRNAi00034523

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R02C2.3a 246651 246854 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006419 oac-39 R02C2.3 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:R02C2.3a 246651 246854 -1
CDS:R02C2.3a 246909 247122 -1
CDS:R02C2.3a 247965 248080 -1
CDS:R02C2.3a 248131 248242 -1
CDS:R02C2.3a 248304 248530 -1
CDS:R02C2.3a 248913 249280 -1
CDS:R02C2.3a 249867 249960 -1
CDS:R02C2.3a 250005 250194 -1
CDS:R02C2.3a 250242 250335 -1
CDS:R02C2.3a 250389 250516 -1
CDS:R02C2.3a 250953 251088 -1
CDS:R02C2.3a 251136 251334 -1
CDS:R02C2.3a 251568 251705 -1

1 Sequence

Length
2220

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R02C2.3a.1 R02C2.3a.1 2310   V: 246608-251752