WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M02H5.6c.2 Sequence Name  M02H5.6c.2
Length (nt)  1652   Chromosome Location  V: 454591-457071
Chromosome . Primary Identifier  V Chromosome Location . Start  454591
Chromosome Location . End  457071 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M02H5.6c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003688 nhr-98 M02H5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M02H5.6c M02H5.6c 1245   V: 454599-454747

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M02H5.6c.2 454591 457071 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon170017   157   V: 454591-454747 Caenorhabditis elegans
Exon170023   131   V: 454793-454923 Caenorhabditis elegans
Exon170027   59   V: 454970-455028 Caenorhabditis elegans
Exon170031   126   V: 455081-455206 Caenorhabditis elegans
Exon170035   210   V: 455275-455484 Caenorhabditis elegans
Exon170039   200   V: 455614-455813 Caenorhabditis elegans
Exon170043   271   V: 456050-456320 Caenorhabditis elegans
Exon170050   498   V: 456574-457071 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M02H5.6c.2 454591 457071 1

1 Sequence

Length
1652

1 Sequence Ontology Term

Identifier Name Description
transcript