WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M02H5.6c Sequence Name  M02H5.6c
Length (nt)  1245   Chromosome Location  V: 454599-454747
Chromosome . Primary Identifier  V Chromosome Location . Start  454599
Chromosome Location . End  454747
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M02H5.6c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21075 NHR-98, isoform c 47.7 414 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00034391
WBRNAi00050839
WBRNAi00017141
WBRNAi00103461

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M02H5.6c 454599 454747 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003688 nhr-98 M02H5.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:M02H5.6c 454599 454747 1
CDS:M02H5.6c 454793 454923 1
CDS:M02H5.6c 454970 455028 1
CDS:M02H5.6c 455081 455206 1
CDS:M02H5.6c 455275 455484 1
CDS:M02H5.6c 455614 455813 1
CDS:M02H5.6c 456050 456320 1
CDS:M02H5.6c 456574 456672 1

1 Sequence

Length
1245

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M02H5.6c.1 M02H5.6c.1 1538   V: 453869-456783
Transcript:M02H5.6c.2 M02H5.6c.2 1652   V: 454591-457071