WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48G7.6a.1 Sequence Name  F48G7.6a.1
Length (nt)  1005   Chromosome Location  V: 623298-625022
Chromosome . Primary Identifier  V Chromosome Location . Start  623298
Chromosome Location . End  625022 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48G7.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018617 srt-17 F48G7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48G7.6a F48G7.6a 1005   V: 623298-623416

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F48G7.6a.1 623298 625022 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon170506   119   V: 623298-623416 Caenorhabditis elegans
Exon170512   280   V: 624026-624305 Caenorhabditis elegans
Exon170516   426   V: 624352-624777 Caenorhabditis elegans
Exon170518   180   V: 624843-625022 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F48G7.6a.1 623298 625022 -1

1 Sequence

Length
1005

1 Sequence Ontology Term

Identifier Name Description
transcript