WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F48G7.6a Sequence Name  F48G7.6a
Length (nt)  1005   Chromosome Location  V: 623298-623416
Chromosome . Primary Identifier  V Chromosome Location . Start  623298
Chromosome Location . End  623416
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48G7.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50832 SRT-17, isoform a 37.8 334 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00047777

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F48G7.6a 623298 623416 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018617 srt-17 F48G7.6 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F48G7.6a 623298 623416 -1
CDS:F48G7.6a 624026 624305 -1
CDS:F48G7.6a 624352 624777 -1
CDS:F48G7.6a 624843 625022 -1

1 Sequence

Length
1005

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F48G7.6a.1 F48G7.6a.1 1005   V: 623298-625022