WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50D4B.1c.1 Sequence Name  Y50D4B.1c.1
Length (nt)  765   Chromosome Location  V: 1122052-1129110
Chromosome . Primary Identifier  V Chromosome Location . Start  1122052
Chromosome Location . End  1129110 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50D4B.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021740 Y50D4B.1 Y50D4B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50D4B.1c Y50D4B.1c 765   V: 1122052-1122150

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50D4B.1c.1 1122052 1129110 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171696   99   V: 1122052-1122150 Caenorhabditis elegans
Exon171699   237   V: 1123495-1123731 Caenorhabditis elegans
Exon171702   210   V: 1127067-1127276 Caenorhabditis elegans
Exon171706   92   V: 1127954-1128045 Caenorhabditis elegans
Exon171709   127   V: 1128984-1129110 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50D4B.1c.1 1122052 1129110 1

1 Sequence

Length
765

1 Sequence Ontology Term

Identifier Name Description
transcript