WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21H3.3a.1 Sequence Name  T21H3.3a.1
Length (nt)  1484   Chromosome Location  V: 1156271-1158189
Chromosome . Primary Identifier  V Chromosome Location . Start  1156271
Chromosome Location . End  1158189 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21H3.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000552 cmd-1 T21H3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21H3.3a T21H3.3a 450   V: 1156308-1156341

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21H3.3a.1 1156271 1158189 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171687   71   V: 1156271-1156341 Caenorhabditis elegans
Exon171688   239   V: 1156623-1156861 Caenorhabditis elegans
Exon171690   148   V: 1156959-1157106 Caenorhabditis elegans
Exon171693   1026   V: 1157164-1158189 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21H3.3a.1 1156271 1158189 1

1 Sequence

Length
1484

1 Sequence Ontology Term

Identifier Name Description
transcript