WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39F7.1b.1 Sequence Name  C39F7.1b.1
Length (nt)  979   Chromosome Location  V: 1260342-1262618
Chromosome . Primary Identifier  V Chromosome Location . Start  1260342
Chromosome Location . End  1262618 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39F7.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016538 C39F7.1 C39F7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39F7.1b C39F7.1b 825   V: 1260465-1260569

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C39F7.1b.1 1260342 1262618 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171843   228   V: 1260342-1260569 Caenorhabditis elegans
Exon171846   489   V: 1261820-1262308 Caenorhabditis elegans
Exon171850   262   V: 1262357-1262618 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C39F7.1b.1 1260342 1262618 1

1 Sequence

Length
979

1 Sequence Ontology Term

Identifier Name Description
transcript