WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C39F7.1b Sequence Name  C39F7.1b
Length (nt)  825   Chromosome Location  V: 1260465-1260569
Chromosome . Primary Identifier  V Chromosome Location . Start  1260465
Chromosome Location . End  1260569
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39F7.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50998 C39F7.1, isoform b 30.6 274 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00027218
WBRNAi00024785
WBRNAi00024786
WBRNAi00011795
WBRNAi00042228

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C39F7.1b 1260465 1260569 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016538 C39F7.1 C39F7.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:C39F7.1b 1260465 1260569 1
CDS:C39F7.1b 1261820 1262308 1
CDS:C39F7.1b 1262357 1262587 1

1 Sequence

Length
825

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C39F7.1b.1 C39F7.1b.1 979   V: 1260342-1262618