WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y32G9A.6a Sequence Name  Y32G9A.6a
Length (nt)  2439   Chromosome Location  V: 1895797-1895874
Chromosome . Primary Identifier  V Chromosome Location . Start  1895797
Chromosome Location . End  1895874
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y32G9A.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47527 NPHP-2, isoform a 91.6 812 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00055798

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y32G9A.6a 1895797 1895874 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021304 nphp-2 Y32G9A.6 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y32G9A.6a 1895797 1895874 1
CDS:Y32G9A.6a 1896959 1897089 1
CDS:Y32G9A.6a 1897135 1897270 1
CDS:Y32G9A.6a 1897317 1897376 1
CDS:Y32G9A.6a 1898421 1899146 1
CDS:Y32G9A.6a 1902311 1902589 1
CDS:Y32G9A.6a 1903043 1903246 1
CDS:Y32G9A.6a 1903296 1903487 1
CDS:Y32G9A.6a 1904182 1904335 1
CDS:Y32G9A.6a 1904382 1904473 1
CDS:Y32G9A.6a 1905672 1905786 1
CDS:Y32G9A.6a 1905833 1905940 1
CDS:Y32G9A.6a 1906338 1906479 1
CDS:Y32G9A.6a 1906539 1906560 1

1 Sequence

Length
2439

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y32G9A.6a.1 Y32G9A.6a.1 2689   V: 1895784-1906797