WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37H5.1a.2 Sequence Name  C37H5.1a.2
Length (nt)  1537   Chromosome Location  V: 4851438-4857293
Chromosome . Primary Identifier  V Chromosome Location . Start  4851438
Chromosome Location . End  4857293 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37H5.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003591 nex-4 C37H5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37H5.1a C37H5.1a 1056   V: 4855385-4855508

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C37H5.1a.2 4851438 4857293 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179889   91   V: 4851438-4851528 Caenorhabditis elegans
Exon179893   184   V: 4855325-4855508 Caenorhabditis elegans
Exon179899   95   V: 4855565-4855659 Caenorhabditis elegans
Exon179904   171   V: 4855739-4855909 Caenorhabditis elegans
Exon179909   72   V: 4855958-4856029 Caenorhabditis elegans
Exon179914   307   V: 4856085-4856391 Caenorhabditis elegans
Exon179919   113   V: 4856441-4856553 Caenorhabditis elegans
Exon179927   504   V: 4856790-4857293 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C37H5.1a.2 4851438 4857293 1

1 Sequence

Length
1537

1 Sequence Ontology Term

Identifier Name Description
transcript