WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C37H5.1a Sequence Name  C37H5.1a
Length (nt)  1056   Chromosome Location  V: 4855385-4855508
Chromosome . Primary Identifier  V Chromosome Location . Start  4855385
Chromosome Location . End  4855508
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37H5.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08625 NEX-4, isoform a 40.6 351 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00042119
WBRNAi00011728
WBRNAi00029644

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C37H5.1a 4855385 4855508 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003591 nex-4 C37H5.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C37H5.1a 4855385 4855508 1
CDS:C37H5.1a 4855565 4855659 1
CDS:C37H5.1a 4855739 4855909 1
CDS:C37H5.1a 4855958 4856029 1
CDS:C37H5.1a 4856085 4856391 1
CDS:C37H5.1a 4856441 4856553 1
CDS:C37H5.1a 4856790 4856963 1

1 Sequence

Length
1056

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C37H5.1a.2 C37H5.1a.2 1537   V: 4851438-4857293
Transcript:C37H5.1a.3 C37H5.1a.3 1650   V: 4853531-4857276
Transcript:C37H5.1a.1 C37H5.1a.1 1429   V: 4855325-4857276