WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F08F3.2a Sequence Name  F08F3.2a
Length (nt)  2157   Chromosome Location  V: 5433417-5433542
Chromosome . Primary Identifier  V Chromosome Location . Start  5433417
Chromosome Location . End  5433542
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F3.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE09258 ACL-6, isoform a 82.1 718 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00044016
WBRNAi00012905
WBRNAi00030653
WBRNAi00062195

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F08F3.2a 5433417 5433542 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017261 acl-6 F08F3.2 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F08F3.2a 5433417 5433542 1
CDS:F08F3.2a 5433586 5433653 1
CDS:F08F3.2a 5433706 5433979 1
CDS:F08F3.2a 5434025 5434391 1
CDS:F08F3.2a 5434448 5434542 1
CDS:F08F3.2a 5434584 5434691 1
CDS:F08F3.2a 5434735 5434912 1
CDS:F08F3.2a 5435447 5435776 1
CDS:F08F3.2a 5435979 5436088 1
CDS:F08F3.2a 5436351 5436494 1
CDS:F08F3.2a 5436548 5436746 1
CDS:F08F3.2a 5436792 5436949 1

1 Sequence

Length
2157

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F08F3.2a.1 F08F3.2a.1 2300   V: 5433392-5437067