WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05C3.2.1 Sequence Name  T05C3.2.1
Length (nt)  5382   Chromosome Location  V: 5493747-5503010
Chromosome . Primary Identifier  V Chromosome Location . Start  5493747
Chromosome Location . End  5503010 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05C3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020254 T05C3.2 T05C3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05C3.2 T05C3.2 5382   V: 5493747-5493965

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T05C3.2.1 5493747 5503010 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181211   219   V: 5493747-5493965 Caenorhabditis elegans
Exon181212   98   V: 5494010-5494107 Caenorhabditis elegans
Exon181213   103   V: 5494152-5494254 Caenorhabditis elegans
Exon181214   321   V: 5494472-5494792 Caenorhabditis elegans
Exon181215   288   V: 5494843-5495130 Caenorhabditis elegans
Exon181216   522   V: 5495302-5495823 Caenorhabditis elegans
Exon181217   306   V: 5496011-5496316 Caenorhabditis elegans
Exon181218   238   V: 5496360-5496597 Caenorhabditis elegans
Exon181219   408   V: 5496654-5497061 Caenorhabditis elegans
Exon181220   173   V: 5497107-5497279 Caenorhabditis elegans
Exon181221   131   V: 5497328-5497458 Caenorhabditis elegans
Exon181222   90   V: 5497720-5497809 Caenorhabditis elegans
Exon181223   188   V: 5497858-5498045 Caenorhabditis elegans
Exon181224   185   V: 5498093-5498277 Caenorhabditis elegans
Exon181225   114   V: 5498538-5498651 Caenorhabditis elegans
Exon181226   103   V: 5498701-5498803 Caenorhabditis elegans
Exon181227   108   V: 5499204-5499311 Caenorhabditis elegans
Exon181228   194   V: 5499358-5499551 Caenorhabditis elegans
Exon181229   186   V: 5499848-5500033 Caenorhabditis elegans
Exon181230   332   V: 5500079-5500410 Caenorhabditis elegans
Exon181231   259   V: 5500460-5500718 Caenorhabditis elegans
Exon181232   168   V: 5500771-5500938 Caenorhabditis elegans
Exon181233   144   V: 5501489-5501632 Caenorhabditis elegans
Exon181234   137   V: 5501685-5501821 Caenorhabditis elegans
Exon181235   101   V: 5502230-5502330 Caenorhabditis elegans
Exon181236   266   V: 5502745-5503010 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T05C3.2.1 5493747 5503010 1

1 Sequence

Length
5382

1 Sequence Ontology Term

Identifier Name Description
transcript