WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05C3.2 Sequence Name  T05C3.2
Length (nt)  5382   Chromosome Location  V: 5493747-5493965
Chromosome . Primary Identifier  V Chromosome Location . Start  5493747
Chromosome Location . End  5493965
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05C3.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47087 T05C3.2 203.9 1793 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00052498
WBRNAi00018221

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05C3.2 5493747 5493965 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020254 T05C3.2 T05C3.2 Caenorhabditis elegans

26 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05C3.2 5493747 5493965 1
CDS:T05C3.2 5494010 5494107 1
CDS:T05C3.2 5494152 5494254 1
CDS:T05C3.2 5494472 5494792 1
CDS:T05C3.2 5494843 5495130 1
CDS:T05C3.2 5495302 5495823 1
CDS:T05C3.2 5496011 5496316 1
CDS:T05C3.2 5496360 5496597 1
CDS:T05C3.2 5496654 5497061 1
CDS:T05C3.2 5497107 5497279 1
CDS:T05C3.2 5497328 5497458 1
CDS:T05C3.2 5497720 5497809 1
CDS:T05C3.2 5497858 5498045 1
CDS:T05C3.2 5498093 5498277 1
CDS:T05C3.2 5498538 5498651 1
CDS:T05C3.2 5498701 5498803 1
CDS:T05C3.2 5499204 5499311 1
CDS:T05C3.2 5499358 5499551 1
CDS:T05C3.2 5499848 5500033 1
CDS:T05C3.2 5500079 5500410 1
CDS:T05C3.2 5500460 5500718 1
CDS:T05C3.2 5500771 5500938 1
CDS:T05C3.2 5501489 5501632 1
CDS:T05C3.2 5501685 5501821 1
CDS:T05C3.2 5502230 5502330 1
CDS:T05C3.2 5502745 5503010 1

1 Sequence

Length
5382

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05C3.2.1 T05C3.2.1 5382   V: 5493747-5503010