WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18C4.10a.1 Sequence Name  C18C4.10a.1
Length (nt)  1806   Chromosome Location  V: 5576478-5581403
Chromosome . Primary Identifier  V Chromosome Location . Start  5576478
Chromosome Location . End  5581403 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18C4.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002215 klc-2 C18C4.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18C4.10a C18C4.10a 1569   V: 5576653-5576694

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18C4.10a.1 5576478 5581403 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181558   217   V: 5576478-5576694 Caenorhabditis elegans
Exon181561   109   V: 5577888-5577996 Caenorhabditis elegans
Exon181566   920   V: 5578047-5578966 Caenorhabditis elegans
Exon181571   317   V: 5579018-5579334 Caenorhabditis elegans
Exon181577   143   V: 5579387-5579529 Caenorhabditis elegans
Exon181582   100   V: 5581304-5581403 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18C4.10a.1 5576478 5581403 -1

1 Sequence

Length
1806

1 Sequence Ontology Term

Identifier Name Description
transcript