WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:CD4.6.1 Sequence Name  CD4.6.1
Length (nt)  989   Chromosome Location  V: 5583161-5584343
Chromosome . Primary Identifier  V Chromosome Location . Start  5583161
Chromosome Location . End  5584343 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
CD4.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003927 pas-6 CD4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CD4.6 CD4.6 783   V: 5583358-5583596

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:CD4.6.1 5583161 5584343 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181585   436   V: 5583161-5583596 Caenorhabditis elegans
Exon181586   130   V: 5583647-5583776 Caenorhabditis elegans
Exon181587   71   V: 5583826-5583896 Caenorhabditis elegans
Exon181588   193   V: 5583946-5584138 Caenorhabditis elegans
Exon181589   159   V: 5584185-5584343 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:CD4.6.1 5583161 5584343 -1

1 Sequence

Length
989

1 Sequence Ontology Term

Identifier Name Description
transcript