WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:CD4.6 Sequence Name  CD4.6
Length (nt)  783   Chromosome Location  V: 5583358-5583596
Chromosome . Primary Identifier  V Chromosome Location . Start  5583358
Chromosome Location . End  5583596
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
CD4.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16954 PAS-6 28.3 260 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00095546
WBRNAi00024925
WBRNAi00066886
WBRNAi00094119
WBRNAi00064386
WBRNAi00094607
WBRNAi00043306
WBRNAi00112134
WBRNAi00094611
WBRNAi00093192
WBRNAi00090974
WBRNAi00078723
WBRNAi00094612
WBRNAi00078758
WBRNAi00078789
WBRNAi00080715
WBRNAi00080685
WBRNAi00085488
WBRNAi00064986
WBRNAi00092756
WBRNAi00000160
WBRNAi00076251
WBRNAi00008567

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:CD4.6 5583358 5583596 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003927 pas-6 CD4.6 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:CD4.6 5583358 5583596 -1
CDS:CD4.6 5583647 5583776 -1
CDS:CD4.6 5583826 5583896 -1
CDS:CD4.6 5583946 5584138 -1
CDS:CD4.6 5584185 5584334 -1

1 Sequence

Length
783

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CD4.6.1 CD4.6.1 989   V: 5583161-5584343