WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F25B4.5 Sequence Name  F25B4.5
Length (nt)  2133   Chromosome Location  V: 5678874-5678956
Chromosome . Primary Identifier  V Chromosome Location . Start  5678874
Chromosome Location . End  5678956
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B4.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28000 PRP-39 82.8 710 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00045468
WBRNAi00013848
WBRNAi00083733
WBRNAi00083631
WBRNAi00083856

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F25B4.5 5678874 5678956 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017768 prp-39 F25B4.5 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F25B4.5 5678874 5678956 -1
CDS:F25B4.5 5679005 5679084 -1
CDS:F25B4.5 5679134 5679229 -1
CDS:F25B4.5 5679282 5679756 -1
CDS:F25B4.5 5680026 5680554 -1
CDS:F25B4.5 5680614 5680914 -1
CDS:F25B4.5 5681195 5681427 -1
CDS:F25B4.5 5681480 5681675 -1
CDS:F25B4.5 5682208 5682285 -1
CDS:F25B4.5 5682569 5682630 -1

1 Sequence

Length
2133

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25B4.5.1 F25B4.5.1 2409   V: 5678598-5682630