WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8j.1 Sequence Name  W06H8.8j.1
Length (nt)  8602   Chromosome Location  V: 6190581-6202620
Chromosome . Primary Identifier  V Chromosome Location . Start  6190581
Chromosome Location . End  6202620 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8j W06H8.8j 8370   V: 6190726-6191105

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06H8.8j.1 6190581 6202620 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon183354   525   V: 6190581-6191105 Caenorhabditis elegans
Exon183356   3960   V: 6191688-6195647 Caenorhabditis elegans
Exon183368   140   V: 6196227-6196366 Caenorhabditis elegans
Exon183379   974   V: 6196429-6197402 Caenorhabditis elegans
Exon183390   512   V: 6197463-6197974 Caenorhabditis elegans
Exon183401   146   V: 6198021-6198166 Caenorhabditis elegans
Exon183412   170   V: 6198323-6198492 Caenorhabditis elegans
Exon183423   962   V: 6198551-6199512 Caenorhabditis elegans
Exon183440   240   V: 6201052-6201291 Caenorhabditis elegans
Exon183451   351   V: 6201486-6201836 Caenorhabditis elegans
Exon183462   139   V: 6201888-6202026 Caenorhabditis elegans
Exon183473   272   V: 6202074-6202345 Caenorhabditis elegans
Exon183480   211   V: 6202410-6202620 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06H8.8j.1 6190581 6202620 -1

1 Sequence

Length
8602

1 Sequence Ontology Term

Identifier Name Description
transcript