WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W06H8.8j Sequence Name  W06H8.8j
Length (nt)  8370   Chromosome Location  V: 6190726-6191105
Chromosome . Primary Identifier  V Chromosome Location . Start  6190726
Chromosome Location . End  6191105
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8j

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52430 TTN-1, isoform j 310.8 2789 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00054919
WBRNAi00054924
WBRNAi00019682
WBRNAi00092181

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W06H8.8j 6190726 6191105 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:W06H8.8j 6190726 6191105 -1
CDS:W06H8.8j 6191688 6195647 -1
CDS:W06H8.8j 6196227 6196366 -1
CDS:W06H8.8j 6196429 6197402 -1
CDS:W06H8.8j 6197463 6197974 -1
CDS:W06H8.8j 6198021 6198166 -1
CDS:W06H8.8j 6198323 6198492 -1
CDS:W06H8.8j 6198551 6199512 -1
CDS:W06H8.8j 6201052 6201291 -1
CDS:W06H8.8j 6201486 6201836 -1
CDS:W06H8.8j 6201888 6202026 -1
CDS:W06H8.8j 6202074 6202345 -1
CDS:W06H8.8j 6202410 6202533 -1

1 Sequence

Length
8370

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W06H8.8j.1 W06H8.8j.1 8602   V: 6190581-6202620