WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.1f.1 Sequence Name  W06H8.1f.1
Length (nt)  2088   Chromosome Location  V: 6214827-6217647
Chromosome . Primary Identifier  V Chromosome Location . Start  6214827
Chromosome Location . End  6217647 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004373 rme-1 W06H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.1f W06H8.1f 1668   V: 6214859-6215009

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06H8.1f.1 6214827 6217647 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon183519   183   V: 6214827-6215009 Caenorhabditis elegans
Exon183525   340   V: 6215067-6215406 Caenorhabditis elegans
Exon183537   680   V: 6215556-6216235 Caenorhabditis elegans
Exon183549   134   V: 6216285-6216418 Caenorhabditis elegans
Exon183565   262   V: 6216789-6217050 Caenorhabditis elegans
Exon183579   489   V: 6217159-6217647 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06H8.1f.1 6214827 6217647 1

1 Sequence

Length
2088

1 Sequence Ontology Term

Identifier Name Description
transcript