WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05H4.11b.2 Sequence Name  T05H4.11b.2
Length (nt)  1678   Chromosome Location  V: 6424248-6426261
Chromosome . Primary Identifier  V Chromosome Location . Start  6424248
Chromosome Location . End  6426261 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05H4.11b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020274 T05H4.11 T05H4.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05H4.11b T05H4.11b 597   V: 6424708-6424894

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05H4.11b.2 6424248 6426261 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184050   647   V: 6424248-6424894 Caenorhabditis elegans
Exon184056   81   V: 6424942-6425022 Caenorhabditis elegans
Exon184060   85   V: 6425071-6425155 Caenorhabditis elegans
Exon184064   95   V: 6425205-6425299 Caenorhabditis elegans
Exon184068   89   V: 6425355-6425443 Caenorhabditis elegans
Exon184070   316   V: 6425528-6425843 Caenorhabditis elegans
Exon184074   365   V: 6425897-6426261 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05H4.11b.2 6424248 6426261 -1

1 Sequence

Length
1678

1 Sequence Ontology Term

Identifier Name Description
transcript