WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05H4.11b Sequence Name  T05H4.11b
Length (nt)  597   Chromosome Location  V: 6424708-6424894
Chromosome . Primary Identifier  V Chromosome Location . Start  6424708
Chromosome Location . End  6424894
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05H4.11b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53067 T05H4.11, isoform b 22.7 198 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052583
WBRNAi00018259
WBRNAi00035238
WBRNAi00062356

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05H4.11b 6424708 6424894 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020274 T05H4.11 T05H4.11 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05H4.11b 6424708 6424894 -1
CDS:T05H4.11b 6424942 6425022 -1
CDS:T05H4.11b 6425071 6425155 -1
CDS:T05H4.11b 6425205 6425299 -1
CDS:T05H4.11b 6425355 6425443 -1
CDS:T05H4.11b 6425528 6425587 -1

1 Sequence

Length
597

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05H4.11b.2 T05H4.11b.2 1678   V: 6424248-6426261
Transcript:T05H4.11b.1 T05H4.11b.1 1069   V: 6424252-6425603