WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05H4.6b.2 Sequence Name  T05H4.6b.2
Length (nt)  1727   Chromosome Location  V: 6434128-6435994
Chromosome . Primary Identifier  V Chromosome Location . Start  6434128
Chromosome Location . End  6435994 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05H4.6b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020269 erfa-1 T05H4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05H4.6b T05H4.6b 1332   V: 6434160-6434269

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05H4.6b.2 6434128 6435994 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184060   142   V: 6434128-6434269 Caenorhabditis elegans
Exon184065   326   V: 6434316-6434641 Caenorhabditis elegans
Exon184068   734   V: 6434688-6435421 Caenorhabditis elegans
Exon184071   525   V: 6435470-6435994 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05H4.6b.2 6434128 6435994 1

1 Sequence

Length
1727

1 Sequence Ontology Term

Identifier Name Description
transcript