WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05H4.6b Sequence Name  T05H4.6b
Length (nt)  1332   Chromosome Location  V: 6434160-6434269
Chromosome . Primary Identifier  V Chromosome Location . Start  6434160
Chromosome Location . End  6434269
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05H4.6b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE13279 ERFA-1, isoform b 49.2 443 Caenorhabditis elegans
 

Other

14 RNAi

WormBase ID
WBRNAi00026208
WBRNAi00035244
WBRNAi00085427
WBRNAi00009127
WBRNAi00052593
WBRNAi00064907
WBRNAi00071537
WBRNAi00096904
WBRNAi00108881
WBRNAi00108936
WBRNAi00108991
WBRNAi00108826
WBRNAi00109045
WBRNAi00096965

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05H4.6b 6434160 6434269 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020269 erfa-1 T05H4.6 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05H4.6b 6434160 6434269 1
CDS:T05H4.6b 6434316 6434641 1
CDS:T05H4.6b 6434688 6435421 1
CDS:T05H4.6b 6435470 6435631 1

1 Sequence

Length
1332

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05H4.6b.2 T05H4.6b.2 1727   V: 6434128-6435994
Transcript:T05H4.6b.1 T05H4.6b.1 1986   V: 6434130-6436398