WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01A11.3c.1 Sequence Name  W01A11.3c.1
Length (nt)  3165   Chromosome Location  V: 6477142-6487883
Chromosome . Primary Identifier  V Chromosome Location . Start  6477142
Chromosome Location . End  6487883 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01A11.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006815 unc-83 W01A11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01A11.3c W01A11.3c 2223   V: 6480975-6480985

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01A11.3c.1 6477142 6487883 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184158   67   V: 6477142-6477208 Caenorhabditis elegans
Exon184165   136   V: 6477260-6477395 Caenorhabditis elegans
Exon184171   215   V: 6480771-6480985 Caenorhabditis elegans
Exon184175   150   V: 6481456-6481605 Caenorhabditis elegans
Exon184180   209   V: 6482763-6482971 Caenorhabditis elegans
Exon184185   155   V: 6483017-6483171 Caenorhabditis elegans
Exon184190   83   V: 6483439-6483521 Caenorhabditis elegans
Exon184195   400   V: 6483827-6484226 Caenorhabditis elegans
Exon184201   524   V: 6485652-6486175 Caenorhabditis elegans
Exon184206   405   V: 6486319-6486723 Caenorhabditis elegans
Exon184212   821   V: 6487063-6487883 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01A11.3c.1 6477142 6487883 1

1 Sequence

Length
3165

1 Sequence Ontology Term

Identifier Name Description
transcript