WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01A11.3c.2 Sequence Name  W01A11.3c.2
Length (nt)  2967   Chromosome Location  V: 6480765-6487882
Chromosome . Primary Identifier  V Chromosome Location . Start  6480765
Chromosome Location . End  6487882 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01A11.3c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006815 unc-83 W01A11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01A11.3c W01A11.3c 2223   V: 6480975-6480985

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01A11.3c.2 6480765 6487882 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184167   221   V: 6480765-6480985 Caenorhabditis elegans
Exon184176   150   V: 6481456-6481605 Caenorhabditis elegans
Exon184181   209   V: 6482763-6482971 Caenorhabditis elegans
Exon184186   155   V: 6483017-6483171 Caenorhabditis elegans
Exon184191   83   V: 6483439-6483521 Caenorhabditis elegans
Exon184196   400   V: 6483827-6484226 Caenorhabditis elegans
Exon184202   524   V: 6485652-6486175 Caenorhabditis elegans
Exon184207   405   V: 6486319-6486723 Caenorhabditis elegans
Exon184210   820   V: 6487063-6487882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01A11.3c.2 6480765 6487882 1

1 Sequence

Length
2967

1 Sequence Ontology Term

Identifier Name Description
transcript