WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K04A8.6a Sequence Name  K04A8.6a
Length (nt)  2811   Chromosome Location  V: 6533990-6534116
Chromosome . Primary Identifier  V Chromosome Location . Start  6533990
Chromosome Location . End  6534116
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04A8.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27388 DRE-1, isoform a 105.1 936 Caenorhabditis elegans
 

Other

19 RNAi

WormBase ID
WBRNAi00095671
WBRNAi00086623
WBRNAi00000623
WBRNAi00049875
WBRNAi00033935
WBRNAi00066799
WBRNAi00086615
WBRNAi00073179
WBRNAi00073178
WBRNAi00073180
WBRNAi00093909
WBRNAi00106833
WBRNAi00112018
WBRNAi00086612
WBRNAi00116302
WBRNAi00086613
WBRNAi00107036
WBRNAi00107048
WBRNAi00098039

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K04A8.6a 6533990 6534116 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001089 dre-1 K04A8.6 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:K04A8.6a 6533990 6534116 -1
CDS:K04A8.6a 6534312 6534410 -1
CDS:K04A8.6a 6534463 6534610 -1
CDS:K04A8.6a 6534714 6535019 -1
CDS:K04A8.6a 6535160 6535340 -1
CDS:K04A8.6a 6535394 6535925 -1
CDS:K04A8.6a 6535979 6536169 -1
CDS:K04A8.6a 6536286 6537138 -1
CDS:K04A8.6a 6537466 6537609 -1
CDS:K04A8.6a 6537705 6537934 -1

1 Sequence

Length
2811

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K04A8.6a.1 K04A8.6a.1 3315   V: 6533614-6538062
Transcript:K04A8.6a.2 K04A8.6a.2 3451   V: 6533617-6546500