WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04A8.6b.1 Sequence Name  K04A8.6b.1
Length (nt)  3069   Chromosome Location  V: 6533990-6546491
Chromosome . Primary Identifier  V Chromosome Location . Start  6533990
Chromosome Location . End  6546491 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04A8.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001089 dre-1 K04A8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04A8.6b K04A8.6b 3069   V: 6533990-6534116

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04A8.6b.1 6533990 6546491 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184331   127   V: 6533990-6534116 Caenorhabditis elegans
Exon184334   99   V: 6534312-6534410 Caenorhabditis elegans
Exon184337   148   V: 6534463-6534610 Caenorhabditis elegans
Exon184340   306   V: 6534714-6535019 Caenorhabditis elegans
Exon184343   181   V: 6535160-6535340 Caenorhabditis elegans
Exon184346   532   V: 6535394-6535925 Caenorhabditis elegans
Exon184349   191   V: 6535979-6536169 Caenorhabditis elegans
Exon184352   853   V: 6536286-6537138 Caenorhabditis elegans
Exon184355   144   V: 6537466-6537609 Caenorhabditis elegans
Exon184358   358   V: 6537705-6538062 Caenorhabditis elegans
Exon184362   130   V: 6546362-6546491 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04A8.6b.1 6533990 6546491 -1

1 Sequence

Length
3069

1 Sequence Ontology Term

Identifier Name Description
transcript