WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10H9.2.1 Sequence Name  T10H9.2.1
Length (nt)  4555   Chromosome Location  V: 6633225-6639665
Chromosome . Primary Identifier  V Chromosome Location . Start  6633225
Chromosome Location . End  6639665 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10H9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004740 scd-2 T10H9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10H9.2 T10H9.2 4266   V: 6633269-6633436

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10H9.2.1 6633225 6639665 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184655   212   V: 6633225-6633436 Caenorhabditis elegans
Exon184656   58   V: 6633482-6633539 Caenorhabditis elegans
Exon184657   180   V: 6633938-6634117 Caenorhabditis elegans
Exon184658   105   V: 6634172-6634276 Caenorhabditis elegans
Exon184659   92   V: 6634323-6634414 Caenorhabditis elegans
Exon184660   128   V: 6634459-6634586 Caenorhabditis elegans
Exon184661   146   V: 6634633-6634778 Caenorhabditis elegans
Exon184662   138   V: 6634916-6635053 Caenorhabditis elegans
Exon184663   335   V: 6635096-6635430 Caenorhabditis elegans
Exon184664   134   V: 6635486-6635619 Caenorhabditis elegans
Exon184665   146   V: 6635665-6635810 Caenorhabditis elegans
Exon184666   251   V: 6635853-6636103 Caenorhabditis elegans
Exon184667   571   V: 6636386-6636956 Caenorhabditis elegans
Exon184668   120   V: 6637005-6637124 Caenorhabditis elegans
Exon184669   117   V: 6637213-6637329 Caenorhabditis elegans
Exon184670   149   V: 6637379-6637527 Caenorhabditis elegans
Exon184671   242   V: 6637581-6637822 Caenorhabditis elegans
Exon184672   127   V: 6637873-6637999 Caenorhabditis elegans
Exon184673   203   V: 6638050-6638252 Caenorhabditis elegans
Exon184674   521   V: 6638372-6638892 Caenorhabditis elegans
Exon184675   251   V: 6639033-6639283 Caenorhabditis elegans
Exon184676   329   V: 6639337-6639665 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10H9.2.1 6633225 6639665 1

1 Sequence

Length
4555

1 Sequence Ontology Term

Identifier Name Description
transcript