WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.4d.1 Sequence Name  T07H8.4d.1
Length (nt)  6090   Chromosome Location  V: 6956537-6966401
Chromosome . Primary Identifier  V Chromosome Location . Start  6956537
Chromosome Location . End  6966401 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4d T07H8.4d 5988   V: 6956638-6956778

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4d.1 6956537 6966401 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186192   53   V: 6956537-6956589 Caenorhabditis elegans
Exon186195   141   V: 6956638-6956778 Caenorhabditis elegans
Exon186206   89   V: 6957029-6957117 Caenorhabditis elegans
Exon186213   226   V: 6957173-6957398 Caenorhabditis elegans
Exon186226   112   V: 6957490-6957601 Caenorhabditis elegans
Exon186234   196   V: 6957769-6957964 Caenorhabditis elegans
Exon186244   91   V: 6958249-6958339 Caenorhabditis elegans
Exon186253   121   V: 6958388-6958508 Caenorhabditis elegans
Exon186262   213   V: 6958557-6958769 Caenorhabditis elegans
Exon186272   704   V: 6958814-6959517 Caenorhabditis elegans
Exon186281   124   V: 6959572-6959695 Caenorhabditis elegans
Exon186291   132   V: 6959741-6959872 Caenorhabditis elegans
Exon186301   143   V: 6959917-6960059 Caenorhabditis elegans
Exon186311   399   V: 6960105-6960503 Caenorhabditis elegans
Exon186320   735   V: 6960550-6961284 Caenorhabditis elegans
Exon186329   55   V: 6961365-6961419 Caenorhabditis elegans
Exon186337   107   V: 6961473-6961579 Caenorhabditis elegans
Exon186345   130   V: 6961658-6961787 Caenorhabditis elegans
Exon186353   70   V: 6961832-6961901 Caenorhabditis elegans
Exon186361   137   V: 6961970-6962106 Caenorhabditis elegans
Exon186369   201   V: 6962156-6962356 Caenorhabditis elegans
Exon186377   204   V: 6962406-6962609 Caenorhabditis elegans
Exon186385   80   V: 6962683-6962762 Caenorhabditis elegans
Exon186393   191   V: 6962818-6963008 Caenorhabditis elegans
Exon186401   242   V: 6963056-6963297 Caenorhabditis elegans
Exon186408   138   V: 6964646-6964783 Caenorhabditis elegans
Exon186416   195   V: 6965152-6965346 Caenorhabditis elegans
Exon186423   331   V: 6965392-6965722 Caenorhabditis elegans
Exon186430   68   V: 6965775-6965842 Caenorhabditis elegans
Exon186437   124   V: 6965890-6966013 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4d.1 6956537 6966401 1

1 Sequence

Length
6090

1 Sequence Ontology Term

Identifier Name Description
transcript