WormMine: CDS CDS:VC5.3b

• WormMine ID: CDS:VC5.3b
• Sequence Name: VC5.3b
• Length (nt): 1200
• Chromosome Location: V: 7079860-7080966
• Chromosome . Primary Identifier: V
• Chromosome Location . Start: 7079860
• Chromosome Location . End: 7080966

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: VC5.3b

Proteins

1 Protein

WormBase ID	Name	Molecular Weight (kDa)	Length	Organism
CE33332	NPA-1, isoform b	46.5	399	Caenorhabditis elegans

Other

6 RNAi

WormBase ID
WBRNAi00054460
WBRNAi00019428
WBRNAi00019430
WBRNAi00062987
WBRNAi00036113
WBRNAi00066153

1 Chromosome

• WormBase ID: V
• Organism: Caenorhabditis elegans
• Length (nt): 20924180

1 Chromosome Location

• Feature . Primary Identifier: CDS:VC5.3b
• Start: 7079860
• End: 7080966
• Strand: 1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans CDS sequence (Fasta)

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00003786	npa-1	VC5.3	Caenorhabditis elegans

2 Locations

• Feature . Primary Identifier: CDS:VC5.3b
• Start: 7079860
• End: 7080966
• Strand: 1

• Feature . Primary Identifier: CDS:VC5.3b
• Start: 7081362
• End: 7081454
• Strand: 1

1 Sequence

• Length: 1200

1 Sequence Ontology Term

• Name: CDS

8 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:VC5.3b.1	VC5.3b.1	4631	V: 7075787-7081545
Transcript:VC5.3b.2	VC5.3b.2	4432	V: 7075955-7081515
Transcript:VC5.3b.4	VC5.3b.4	4365	V: 7076349-7081497
Transcript:VC5.3b.3	VC5.3b.3	4348	V: 7076349-7081522
Transcript:VC5.3b.5	VC5.3b.5	4404	V: 7076355-7081539
Transcript:VC5.3b.6	VC5.3b.6	4315	V: 7076491-7081522
Transcript:VC5.3b.7	VC5.3b.7	4336	V: 7076493-7081500
Transcript:VC5.3b.8	VC5.3b.8	1755	V: 7079327-7081522