WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37C3.6c.1 Sequence Name  C37C3.6c.1
Length (nt)  4875   Chromosome Location  V: 7827217-7833673
Chromosome . Primary Identifier  V Chromosome Location . Start  7827217
Chromosome Location . End  7833673 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37C3.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003242 mig-6 C37C3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37C3.6c C37C3.6c 4464   V: 7827300-7827395

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C37C3.6c.1 7827217 7833673 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188437   179   V: 7827217-7827395 Caenorhabditis elegans
Exon188444   215   V: 7827451-7827665 Caenorhabditis elegans
Exon188448   156   V: 7828167-7828322 Caenorhabditis elegans
Exon188452   152   V: 7828370-7828521 Caenorhabditis elegans
Exon188456   757   V: 7828572-7829328 Caenorhabditis elegans
Exon188460   232   V: 7829453-7829684 Caenorhabditis elegans
Exon188464   122   V: 7829763-7829884 Caenorhabditis elegans
Exon188468   1585   V: 7829936-7831520 Caenorhabditis elegans
Exon188472   784   V: 7831588-7832371 Caenorhabditis elegans
Exon188477   693   V: 7832981-7833673 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C37C3.6c.1 7827217 7833673 1

1 Sequence

Length
4875

1 Sequence Ontology Term

Identifier Name Description
transcript