WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37C3.6b.1 Sequence Name  C37C3.6b.1
Length (nt)  6739   Chromosome Location  V: 7827228-7842390
Chromosome . Primary Identifier  V Chromosome Location . Start  7827228
Chromosome Location . End  7842390 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37C3.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003242 mig-6 C37C3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37C3.6b C37C3.6b 6504   V: 7827300-7827395

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C37C3.6b.1 7827228 7842390 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188438   168   V: 7827228-7827395 Caenorhabditis elegans
Exon188443   215   V: 7827451-7827665 Caenorhabditis elegans
Exon188447   156   V: 7828167-7828322 Caenorhabditis elegans
Exon188451   152   V: 7828370-7828521 Caenorhabditis elegans
Exon188455   757   V: 7828572-7829328 Caenorhabditis elegans
Exon188459   232   V: 7829453-7829684 Caenorhabditis elegans
Exon188463   122   V: 7829763-7829884 Caenorhabditis elegans
Exon188467   1585   V: 7829936-7831520 Caenorhabditis elegans
Exon188471   784   V: 7831588-7832371 Caenorhabditis elegans
Exon188475   213   V: 7832446-7832658 Caenorhabditis elegans
Exon188476   354   V: 7832981-7833334 Caenorhabditis elegans
Exon188480   97   V: 7833825-7833921 Caenorhabditis elegans
Exon188481   129   V: 7834668-7834796 Caenorhabditis elegans
Exon188484   351   V: 7834847-7835197 Caenorhabditis elegans
Exon188488   79   V: 7835280-7835358 Caenorhabditis elegans
Exon188500   92   V: 7840437-7840528 Caenorhabditis elegans
Exon188503   589   V: 7840926-7841514 Caenorhabditis elegans
Exon188506   664   V: 7841727-7842390 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C37C3.6b.1 7827228 7842390 1

1 Sequence

Length
6739

1 Sequence Ontology Term

Identifier Name Description
transcript