WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09H5.3.1 Sequence Name  C09H5.3.1
Length (nt)  1139   Chromosome Location  V: 8065780-8067900
Chromosome . Primary Identifier  V Chromosome Location . Start  8065780
Chromosome Location . End  8067900 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09H5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006188 str-140 C09H5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09H5.3 C09H5.3 1041   V: 8065878-8065984

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09H5.3.1 8065780 8067900 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon189091   205   V: 8065780-8065984 Caenorhabditis elegans
Exon189092   178   V: 8066033-8066210 Caenorhabditis elegans
Exon189093   406   V: 8066258-8066663 Caenorhabditis elegans
Exon189094   164   V: 8066941-8067104 Caenorhabditis elegans
Exon189095   186   V: 8067715-8067900 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09H5.3.1 8065780 8067900 -1

1 Sequence

Length
1139

1 Sequence Ontology Term

Identifier Name Description
transcript