WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25G6.1.1 Sequence Name  F25G6.1.1
Length (nt)  4019   Chromosome Location  V: 8575062-8579957
Chromosome . Primary Identifier  V Chromosome Location . Start  8575062
Chromosome Location . End  8579957 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25G6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017796 F25G6.1 F25G6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25G6.1 F25G6.1 1683   V: 8576186-8576241

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F25G6.1.1 8575062 8579957 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190258   1180   V: 8575062-8576241 Caenorhabditis elegans
Exon190263   244   V: 8576317-8576560 Caenorhabditis elegans
Exon190268   97   V: 8576609-8576705 Caenorhabditis elegans
Exon190273   104   V: 8576754-8576857 Caenorhabditis elegans
Exon190278   127   V: 8576902-8577028 Caenorhabditis elegans
Exon190283   280   V: 8577077-8577356 Caenorhabditis elegans
Exon190288   193   V: 8577401-8577593 Caenorhabditis elegans
Exon190293   111   V: 8577645-8577755 Caenorhabditis elegans
Exon190298   107   V: 8577801-8577907 Caenorhabditis elegans
Exon190303   185   V: 8578052-8578236 Caenorhabditis elegans
Exon190308   172   V: 8578282-8578453 Caenorhabditis elegans
Exon190313   115   V: 8578502-8578616 Caenorhabditis elegans
Exon190318   84   V: 8578674-8578757 Caenorhabditis elegans
Exon190323   198   V: 8578806-8579003 Caenorhabditis elegans
Exon190328   165   V: 8579050-8579214 Caenorhabditis elegans
Exon190330   114   V: 8579258-8579371 Caenorhabditis elegans
Exon190336   543   V: 8579415-8579957 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F25G6.1.1 8575062 8579957 1

1 Sequence

Length
4019

1 Sequence Ontology Term

Identifier Name Description
transcript