WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F25G6.1 Sequence Name  F25G6.1
Length (nt)  1683   Chromosome Location  V: 8576186-8576241
Chromosome . Primary Identifier  V Chromosome Location . Start  8576186
Chromosome Location . End  8576241
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25G6.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32877 F25G6.1 63.9 560 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00045522
WBRNAi00045523
WBRNAi00013882
WBRNAi00016248
WBRNAi00016285
WBRNAi00031382

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F25G6.1 8576186 8576241 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017796 F25G6.1 F25G6.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F25G6.1 8576186 8576241 1
CDS:F25G6.1 8576317 8576560 1
CDS:F25G6.1 8576609 8576705 1
CDS:F25G6.1 8576754 8576857 1
CDS:F25G6.1 8576902 8577028 1
CDS:F25G6.1 8577077 8577356 1
CDS:F25G6.1 8577401 8577593 1
CDS:F25G6.1 8577645 8577755 1
CDS:F25G6.1 8577801 8577907 1
CDS:F25G6.1 8578052 8578236 1
CDS:F25G6.1 8578282 8578453 1
CDS:F25G6.1 8578502 8578508 1

1 Sequence

Length
1683

1 Sequence Ontology Term

Identifier Name Description
CDS  

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25G6.1.1 F25G6.1.1 4019   V: 8575062-8579957
Transcript:F25G6.1.2 F25G6.1.2 3770   V: 8575119-8579719
Transcript:F25G6.1.5 F25G6.1.5 2867   V: 8576095-8579755
Transcript:F25G6.1.4 F25G6.1.4 2850   V: 8576095-8579781
Transcript:F25G6.1.3 F25G6.1.3 2973   V: 8576095-8579901