WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25G6.1.2 Sequence Name  F25G6.1.2
Length (nt)  3770   Chromosome Location  V: 8575119-8579719
Chromosome . Primary Identifier  V Chromosome Location . Start  8575119
Chromosome Location . End  8579719 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25G6.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017796 F25G6.1 F25G6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25G6.1 F25G6.1 1683   V: 8576186-8576241

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.1.2 8575119 8579719 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190259   1123   V: 8575119-8576241 Caenorhabditis elegans
Exon190264   244   V: 8576317-8576560 Caenorhabditis elegans
Exon190269   97   V: 8576609-8576705 Caenorhabditis elegans
Exon190274   104   V: 8576754-8576857 Caenorhabditis elegans
Exon190279   127   V: 8576902-8577028 Caenorhabditis elegans
Exon190284   280   V: 8577077-8577356 Caenorhabditis elegans
Exon190289   193   V: 8577401-8577593 Caenorhabditis elegans
Exon190294   111   V: 8577645-8577755 Caenorhabditis elegans
Exon190299   107   V: 8577801-8577907 Caenorhabditis elegans
Exon190304   185   V: 8578052-8578236 Caenorhabditis elegans
Exon190309   172   V: 8578282-8578453 Caenorhabditis elegans
Exon190314   115   V: 8578502-8578616 Caenorhabditis elegans
Exon190319   84   V: 8578674-8578757 Caenorhabditis elegans
Exon190325   409   V: 8578806-8579214 Caenorhabditis elegans
Exon190331   114   V: 8579258-8579371 Caenorhabditis elegans
Exon190334   305   V: 8579415-8579719 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.1.2 8575119 8579719 1

1 Sequence

Length
3770

1 Sequence Ontology Term

Identifier Name Description
transcript