WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25G6.1.5 Sequence Name  F25G6.1.5
Length (nt)  2867   Chromosome Location  V: 8576095-8579755
Chromosome . Primary Identifier  V Chromosome Location . Start  8576095
Chromosome Location . End  8579755 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25G6.1.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017796 F25G6.1 F25G6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25G6.1 F25G6.1 1683   V: 8576186-8576241

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.1.5 8576095 8579755 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190260   147   V: 8576095-8576241 Caenorhabditis elegans
Exon190267   244   V: 8576317-8576560 Caenorhabditis elegans
Exon190272   97   V: 8576609-8576705 Caenorhabditis elegans
Exon190277   104   V: 8576754-8576857 Caenorhabditis elegans
Exon190282   127   V: 8576902-8577028 Caenorhabditis elegans
Exon190287   280   V: 8577077-8577356 Caenorhabditis elegans
Exon190292   193   V: 8577401-8577593 Caenorhabditis elegans
Exon190297   111   V: 8577645-8577755 Caenorhabditis elegans
Exon190302   107   V: 8577801-8577907 Caenorhabditis elegans
Exon190307   185   V: 8578052-8578236 Caenorhabditis elegans
Exon190312   172   V: 8578282-8578453 Caenorhabditis elegans
Exon190317   115   V: 8578502-8578616 Caenorhabditis elegans
Exon190322   84   V: 8578674-8578757 Caenorhabditis elegans
Exon190327   409   V: 8578806-8579214 Caenorhabditis elegans
Exon190333   492   V: 8579264-8579755 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.1.5 8576095 8579755 1

1 Sequence

Length
2867

1 Sequence Ontology Term

Identifier Name Description
transcript