WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25G6.1.4 Sequence Name  F25G6.1.4
Length (nt)  2850   Chromosome Location  V: 8576095-8579781
Chromosome . Primary Identifier  V Chromosome Location . Start  8576095
Chromosome Location . End  8579781 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25G6.1.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017796 F25G6.1 F25G6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25G6.1 F25G6.1 1683   V: 8576186-8576241

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.1.4 8576095 8579781 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190261   147   V: 8576095-8576241 Caenorhabditis elegans
Exon190266   244   V: 8576317-8576560 Caenorhabditis elegans
Exon190271   97   V: 8576609-8576705 Caenorhabditis elegans
Exon190276   104   V: 8576754-8576857 Caenorhabditis elegans
Exon190281   127   V: 8576902-8577028 Caenorhabditis elegans
Exon190286   280   V: 8577077-8577356 Caenorhabditis elegans
Exon190291   193   V: 8577401-8577593 Caenorhabditis elegans
Exon190296   111   V: 8577645-8577755 Caenorhabditis elegans
Exon190301   107   V: 8577801-8577907 Caenorhabditis elegans
Exon190306   185   V: 8578052-8578236 Caenorhabditis elegans
Exon190311   172   V: 8578282-8578453 Caenorhabditis elegans
Exon190316   115   V: 8578502-8578616 Caenorhabditis elegans
Exon190321   84   V: 8578674-8578757 Caenorhabditis elegans
Exon190326   409   V: 8578806-8579214 Caenorhabditis elegans
Exon190332   114   V: 8579258-8579371 Caenorhabditis elegans
Exon190337   361   V: 8579421-8579781 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.1.4 8576095 8579781 1

1 Sequence

Length
2850

1 Sequence Ontology Term

Identifier Name Description
transcript