WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25G6.1.3 Sequence Name  F25G6.1.3
Length (nt)  2973   Chromosome Location  V: 8576095-8579901
Chromosome . Primary Identifier  V Chromosome Location . Start  8576095
Chromosome Location . End  8579901 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25G6.1.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017796 F25G6.1 F25G6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25G6.1 F25G6.1 1683   V: 8576186-8576241

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.1.3 8576095 8579901 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190262   147   V: 8576095-8576241 Caenorhabditis elegans
Exon190265   244   V: 8576317-8576560 Caenorhabditis elegans
Exon190270   97   V: 8576609-8576705 Caenorhabditis elegans
Exon190275   104   V: 8576754-8576857 Caenorhabditis elegans
Exon190280   127   V: 8576902-8577028 Caenorhabditis elegans
Exon190285   280   V: 8577077-8577356 Caenorhabditis elegans
Exon190290   193   V: 8577401-8577593 Caenorhabditis elegans
Exon190295   111   V: 8577645-8577755 Caenorhabditis elegans
Exon190300   107   V: 8577801-8577907 Caenorhabditis elegans
Exon190305   185   V: 8578052-8578236 Caenorhabditis elegans
Exon190310   172   V: 8578282-8578453 Caenorhabditis elegans
Exon190315   115   V: 8578502-8578616 Caenorhabditis elegans
Exon190320   84   V: 8578674-8578757 Caenorhabditis elegans
Exon190324   198   V: 8578806-8579003 Caenorhabditis elegans
Exon190329   322   V: 8579050-8579371 Caenorhabditis elegans
Exon190335   487   V: 8579415-8579901 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.1.3 8576095 8579901 1

1 Sequence

Length
2973

1 Sequence Ontology Term

Identifier Name Description
transcript