WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0507.6.1 Sequence Name  B0507.6.1
Length (nt)  2142   Chromosome Location  V: 8746158-8750197
Chromosome . Primary Identifier  V Chromosome Location . Start  8746158
Chromosome Location . End  8750197 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0507.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015223 B0507.6 B0507.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0507.6 B0507.6 2118   V: 8746162-8746224

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0507.6.1 8746158 8750197 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190792   67   V: 8746158-8746224 Caenorhabditis elegans
Exon190793   84   V: 8746273-8746356 Caenorhabditis elegans
Exon190794   162   V: 8746412-8746573 Caenorhabditis elegans
Exon190795   120   V: 8747471-8747590 Caenorhabditis elegans
Exon190796   60   V: 8747638-8747697 Caenorhabditis elegans
Exon190797   107   V: 8747880-8747986 Caenorhabditis elegans
Exon190798   490   V: 8748038-8748527 Caenorhabditis elegans
Exon190799   148   V: 8748673-8748820 Caenorhabditis elegans
Exon190800   74   V: 8748917-8748990 Caenorhabditis elegans
Exon190801   323   V: 8749205-8749527 Caenorhabditis elegans
Exon190802   109   V: 8749570-8749678 Caenorhabditis elegans
Exon190803   123   V: 8749726-8749848 Caenorhabditis elegans
Exon190804   275   V: 8749923-8750197 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0507.6.1 8746158 8750197 1

1 Sequence

Length
2142

1 Sequence Ontology Term

Identifier Name Description
transcript