WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27E4.6a.1 Sequence Name  T27E4.6a.1
Length (nt)  2254   Chromosome Location  V: 9069857-9073540
Chromosome . Primary Identifier  V Chromosome Location . Start  9069857
Chromosome Location . End  9073540 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27E4.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020864 oac-50 T27E4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27E4.6a T27E4.6a 2196   V: 9069903-9070211

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27E4.6a.1 9069857 9073540 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191583   355   V: 9069857-9070211 Caenorhabditis elegans
Exon191585   241   V: 9070259-9070499 Caenorhabditis elegans
Exon191587   204   V: 9070547-9070750 Caenorhabditis elegans
Exon191589   103   V: 9070800-9070902 Caenorhabditis elegans
Exon191591   177   V: 9070946-9071122 Caenorhabditis elegans
Exon191593   86   V: 9071176-9071261 Caenorhabditis elegans
Exon191595   71   V: 9071313-9071383 Caenorhabditis elegans
Exon191597   122   V: 9071427-9071548 Caenorhabditis elegans
Exon191599   156   V: 9071594-9071749 Caenorhabditis elegans
Exon191601   104   V: 9072057-9072160 Caenorhabditis elegans
Exon191603   349   V: 9072203-9072551 Caenorhabditis elegans
Exon191605   187   V: 9073206-9073392 Caenorhabditis elegans
Exon191608   99   V: 9073442-9073540 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27E4.6a.1 9069857 9073540 -1

1 Sequence

Length
2254

1 Sequence Ontology Term

Identifier Name Description
transcript