WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T27E4.6a Sequence Name  T27E4.6a
Length (nt)  2196   Chromosome Location  V: 9069903-9070211
Chromosome . Primary Identifier  V Chromosome Location . Start  9069903
Chromosome Location . End  9070211
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27E4.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51412 OAC-50, isoform a 84.2 731 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00054315
WBRNAi00019334
WBRNAi00036033
WBRNAi00103550
WBRNAi00023329
WBRNAi00023617
WBRNAi00023842
WBRNAi00024130

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T27E4.6a 9069903 9070211 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020864 oac-50 T27E4.6 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:T27E4.6a 9069903 9070211 -1
CDS:T27E4.6a 9070259 9070499 -1
CDS:T27E4.6a 9070547 9070750 -1
CDS:T27E4.6a 9070800 9070902 -1
CDS:T27E4.6a 9070946 9071122 -1
CDS:T27E4.6a 9071176 9071261 -1
CDS:T27E4.6a 9071313 9071383 -1
CDS:T27E4.6a 9071427 9071548 -1
CDS:T27E4.6a 9071594 9071749 -1
CDS:T27E4.6a 9072057 9072160 -1
CDS:T27E4.6a 9072203 9072551 -1
CDS:T27E4.6a 9073206 9073392 -1
CDS:T27E4.6a 9073442 9073528 -1

1 Sequence

Length
2196

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T27E4.6a.1 T27E4.6a.1 2254   V: 9069857-9073540