WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07C3.1.1 Sequence Name  F07C3.1.1
Length (nt)  2959   Chromosome Location  V: 9250232-9254328
Chromosome . Primary Identifier  V Chromosome Location . Start  9250232
Chromosome Location . End  9254328 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07C3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004211 ptd-2 F07C3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07C3.1 F07C3.1 2811   V: 9250275-9250315

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F07C3.1.1 9250232 9254328 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192018   84   V: 9250232-9250315 Caenorhabditis elegans
Exon192019   124   V: 9250372-9250495 Caenorhabditis elegans
Exon192020   104   V: 9250626-9250729 Caenorhabditis elegans
Exon192021   220   V: 9250773-9250992 Caenorhabditis elegans
Exon192022   182   V: 9251046-9251227 Caenorhabditis elegans
Exon192023   145   V: 9251273-9251417 Caenorhabditis elegans
Exon192024   175   V: 9251464-9251638 Caenorhabditis elegans
Exon192025   110   V: 9251684-9251793 Caenorhabditis elegans
Exon192026   117   V: 9251846-9251962 Caenorhabditis elegans
Exon192027   182   V: 9252007-9252188 Caenorhabditis elegans
Exon192028   289   V: 9252234-9252522 Caenorhabditis elegans
Exon192029   119   V: 9252575-9252693 Caenorhabditis elegans
Exon192030   202   V: 9252740-9252941 Caenorhabditis elegans
Exon192031   128   V: 9252988-9253115 Caenorhabditis elegans
Exon192032   177   V: 9253324-9253500 Caenorhabditis elegans
Exon192033   149   V: 9253549-9253697 Caenorhabditis elegans
Exon192034   230   V: 9253810-9254039 Caenorhabditis elegans
Exon192035   222   V: 9254107-9254328 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F07C3.1.1 9250232 9254328 1

1 Sequence

Length
2959

1 Sequence Ontology Term

Identifier Name Description
transcript