WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F07C3.1 Sequence Name  F07C3.1
Length (nt)  2811   Chromosome Location  V: 9250275-9250315
Chromosome . Primary Identifier  V Chromosome Location . Start  9250275
Chromosome Location . End  9250315
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07C3.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35270 PTD-2 105.8 936 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00043874
WBRNAi00000555
WBRNAi00012802
WBRNAi00030594

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F07C3.1 9250275 9250315 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004211 ptd-2 F07C3.1 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:F07C3.1 9250275 9250315 1
CDS:F07C3.1 9250372 9250495 1
CDS:F07C3.1 9250626 9250729 1
CDS:F07C3.1 9250773 9250992 1
CDS:F07C3.1 9251046 9251227 1
CDS:F07C3.1 9251273 9251417 1
CDS:F07C3.1 9251464 9251638 1
CDS:F07C3.1 9251684 9251793 1
CDS:F07C3.1 9251846 9251962 1
CDS:F07C3.1 9252007 9252188 1
CDS:F07C3.1 9252234 9252522 1
CDS:F07C3.1 9252575 9252693 1
CDS:F07C3.1 9252740 9252941 1
CDS:F07C3.1 9252988 9253115 1
CDS:F07C3.1 9253324 9253500 1
CDS:F07C3.1 9253549 9253697 1
CDS:F07C3.1 9253810 9254039 1
CDS:F07C3.1 9254107 9254223 1

1 Sequence

Length
2811

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F07C3.1.1 F07C3.1.1 2959   V: 9250232-9254328